Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015802100.1_cds_XP_016478209.1_6949
CDS Infomation

[gene=LOC107799585] [db_xref=GeneID:107799585] [protein=protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like] [protein_id=XP_016478209.1] [location=complement(25494..26807)] [gbkey=CDS]
Sequence

ATGGAACAACAGGTTAATCAAAGGAGTGAAAATCATGATTTTACCAGAAGACAAGATTGG
GATCCAAAAGCCATGTTAAACAATATGTCTTTTCTTGAACAAAAGATTCATCAACTGCAG
GAGCTGGTGCGTATAATTGTTGACCACAGAAGTCTAGCTGGGATTCAGGGAAATGACCTT
TCAATTCAGCAACAACAGCTAATAATTGCTGATCTTACCTCTATCATTGTTCAATTAATA
TCAACTGCAGGGAGTCTTCTTCCAACCGTAAAGCATCATACACTTTCCTCCGCGAGCCCA
ACTACTAAGCAACCTGCACAGTTTGGTGGTGTTTGGGTTCCTTCTGGAAAAGTTATTGAT
GCCGGTGCACTACCACACAGTGTTAATGTAACTAAGGCAGAAGATCAGCCCAACCATGTT
GATCTAATGGGCGATTGTGGCATTGTACAGAAGTATGATGTTGATGAACATGAGGCGAAA
GATGAAGATGAATTCCATGACGAAGAGAACCTTCCCCCTGGTTCCTACGAGATTCTGCAG
CTGGAGAAAGAGGAAATTCTTGCACCTCACACTCACTTCTGCACAATTTGTGGGAAGGGA
TTTAAGAGAGATGCCAATTTGCGGATGCATATGAGGGGTCATGGGGATGAGTACAAAACT
CCAGCTGCTCTTGCAAAGCCTCACAAGGATCCCAGCTCTGGGACGATGACTCTTATTAAA
AGGTATTCCTGTCCTTGTGTTGGTTGCAAGCGCAACAAGGAACATAAAAGGTTTCAGCCG
TTAAAAACTATCTTATGTGTGAAAAACCATTACAAAAGAACCCACTGTGAGAAAAGCTAT
GCTTGTAGTAGGTGCAATCTGAAGAAATTTTCAGTTATTGCAGATCTTAGAACACATGAG
AAGCATTGTGGTATAGATAAATGGCTTTGTTCTTGTGGAACAACCTTTTCCAGGAAAGAT
AAGCTTTTTGGACACATTTCCCTTTTCCAAGGACATACACCTGCAATTCCTCTAGATGAA
ACCAAAGGTTTTGCTGGGACATCTGATCAAGGCCAAATAGGTAAAGCAACGACAGAGGCT
GGAGAGATCGGTTTTGAGTTAAATGTTCAGAATGGTAGTGGGCTTCAAACTACTATAAAT
GTAAAAGAGGATGCAGATAATCCTGGCAGTTATTTGTCACCTTTGAACATTGAAACTTGC
AAGCTTAGCGAACTCCAAGAGTTTCCCCAGCCACCATTTGAGGACCCAGAAAACTCATTC
TCTTTTCTACTGTCAGGTTCATGTAATTACCCTCAGAGGGCTGGGAAAATATAG

Peptide Sequence

PEP ID

XP_016478209.1
PEP Infomation

PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Nicotiana tabacum]
Sequence

MEQQVNQRSENHDFTRRQDWDPKAMLNNMSFLEQKIHQLQELVRIIVDHRSLAGIQGNDL
SIQQQQLIIADLTSIIVQLISTAGSLLPTVKHHTLSSASPTTKQPAQFGGVWVPSGKVID
AGALPHSVNVTKAEDQPNHVDLMGDCGIVQKYDVDEHEAKDEDEFHDEENLPPGSYEILQ
LEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKDPSSGTMTLIK
RYSCPCVGCKRNKEHKRFQPLKTILCVKNHYKRTHCEKSYACSRCNLKKFSVIADLRTHE
KHCGIDKWLCSCGTTFSRKDKLFGHISLFQGHTPAIPLDETKGFAGTSDQGQIGKATTEA
GEIGFELNVQNGSGLQTTINVKEDADNPGSYLSPLNIETCKLSELQEFPQPPFEDPENSF
SFLLSGSCNYPQRAGKI

Transcript Sequence

Gene sequence data has not been registered.